Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015903273.1_cds_XP_016453261.1_47404
CDS Infomation

[gene=LOC107777688] [db_xref=GeneID:107777688] [protein=patellin-3-like] [protein_id=XP_016453261.1] [location=complement(join(36572..36823,37374..37515,37632..37756,38217..39593))] [gbkey=CDS]
Sequence

ATGGCCGAAGAAACCAAGAAACCAGCCTCTGAGACTACAACAGAGACAACTCAAGAGGTT
GTCGTGACCGATGTCCCTGTGCCGGAAAAGGAAGTCTCTACCCCTCAACCTGAACCGGTA
CCTGTCCCTGACACGCCGGAGAAATCTGCTGCTCCGGCGCCGGAGGAAAGTACTGAAGCT
GAAACTGATAAGGAAAAAGATGCTGTTGCTGAATCTGCTTCGTTTAAGGAAGAGAGTAAC
AAAGTTGAAGAGCTCCCAAATCCTGAACAAAAGGCTTTAGCGGAGTTGAAACAGTTGGTT
CAAGAGGCTCTGAACAAACATGAATTCACTGCTCCGCCGCCACCCCCTCCGGCCAAGGAG
GAGGAGAAAAAACCAGATGCTGAAACAGCTGAACCTGCCGCTGCCGCTGCCCCAGAGGAG
GAAGAGAAAAAGGAAGAACCTGCTGTTGCTGCTGCTGAAACTACCGCCGCAGCTGATGTT
CCGGCTGAGACCCCGGCGATAGCGGAGCCAGTGAAGGAAGAAGTGAAGAAAGAAACTCCA
CCACCAGCTCCAGCGGCGGTGGTGGAAGAGAAGAAAGAAACTCCACCACCAGCTCTGGCA
GCGGTGGAAGAGAAGAAAGAGGAGGAGAAAGCAATTCCACCACCAGCAGCACCGGCGGCC
GCAGAGTCATCGGAGAAAGTGACCGAAAAGGTTGCAGCAGTGGTGGAAGATGACGGTGCT
AAAACCGTGGAGGAAATCAAGGAGACAATTGTTGAAGTCACAGCCGCCGCAGCACCACCA
GCACCCGCGGAGGAACCAGCAGTTCCAGCAGCCGCAGAGGAGGAGAAACCAACCGAAGAA
CCAAAAGAAGAAATCCAACCAGAAGAAGTATCCATCTGGGGAATTCCCTTATTGGCTGAC
GAGAGGAGTGACGTCATCCTCCTCAAGTTCCTCAGAGCCAGAGATTTTAAGGTGAAGGAA
GCTTTTGCCATGTTAAAAAGTGTCGTGGCATGGCGAAAAGAGTTCAAGATTGATGAACTT
TTGGAAGAAGATCTGTCGGGATTAGGACTAGAGAAAGTTGTGTACAATCATGGGGTTGAC
AAAGAAGGACATCCAGTGTGTTACAATGCATTTGCGGCATTTCAGGATAATGAATTGTAC
CAAAATACTTTTGCTGATAAGGAGAAGATGAACAAGTTCCTCAGATGGAGAATTCAGTTT
ATGGAGAAGTCTATTAGGAACCTTGATTTTAGCCCTGATGGCATATGCACTTTTGTTCAG
GTTATTGATCTCAAGAATTCACCTGGACTTTACTTTTTCAAGAAAGAGCTTCGACAGGCT
ACAAACCGTGCCCTTCAATTACTCCAGGACAATTACCCTGAATTTGTTGCCAAGCAGGTG
TTCATCAATGTGCCATGGTGGTATCCAGCTTACTACAGAATGATTAATGCACTTTTCACT
ACAAGGACCAAGAGCAAGTTTGTCTTTGCTGGCCCTTCAAGATCTGCTGAGACTCTCTTC
AAATATATTGTCCCTGAACAAGTGCCAGCTCAATATGGTGGACTTAGTAGGGAGGGTGAA
CAGGAATTCACCACTACTGAGGCTGCAACTGAGGATACCATTAAGCCTACTTCCAAACAC
ACTATTGAATTCCCAGTTACTGAGAAGATTACTTTGGTGTGGGAAGCTAGAGTAATAGGG
TGGGATGTGTCCTATGGAGCTGAATTTGTGCCTAGTGCTGAAGGTGGATACACAATCATT
GTGGAGAAATCAAGAAAGGTTGCAGCAGCAGATGAAACAGTGATTACCAACACCTATACA
ACAGTAGAAGCAGGGAAGATTGTGCTTACATTTGACAACCAAACATCTAAGAGGAAGAAG
CTTGTCTACAGGTCCAAGACCAAGCCCTCTGATTGA

Peptide Sequence

PEP ID

XP_016453261.1
PEP Infomation

PREDICTED: patellin-3-like [Nicotiana tabacum]
Sequence

MAEETKKPASETTTETTQEVVVTDVPVPEKEVSTPQPEPVPVPDTPEKSAAPAPEESTEA
ETDKEKDAVAESASFKEESNKVEELPNPEQKALAELKQLVQEALNKHEFTAPPPPPPAKE
EEKKPDAETAEPAAAAAPEEEEKKEEPAVAAAETTAAADVPAETPAIAEPVKEEVKKETP
PPAPAAVVEEKKETPPPALAAVEEKKEEEKAIPPPAAPAAAESSEKVTEKVAAVVEDDGA
KTVEEIKETIVEVTAAAAPPAPAEEPAVPAAAEEEKPTEEPKEEIQPEEVSIWGIPLLAD
ERSDVILLKFLRARDFKVKEAFAMLKSVVAWRKEFKIDELLEEDLSGLGLEKVVYNHGVD
KEGHPVCYNAFAAFQDNELYQNTFADKEKMNKFLRWRIQFMEKSIRNLDFSPDGICTFVQ
VIDLKNSPGLYFFKKELRQATNRALQLLQDNYPEFVAKQVFINVPWWYPAYYRMINALFT
TRTKSKFVFAGPSRSAETLFKYIVPEQVPAQYGGLSREGEQEFTTTEAATEDTIKPTSKH
TIEFPVTEKITLVWEARVIGWDVSYGAEFVPSAEGGYTIIVEKSRKVAAADETVITNTYT
TVEAGKIVLTFDNQTSKRKKLVYRSKTKPSD

Transcript Sequence

Gene sequence data has not been registered.